{"id":3423,"date":"2026-10-26T14:16:04","date_gmt":"2026-10-26T01:16:04","guid":{"rendered":"https:\/\/www.workstem.com\/au\/blog\/auto-draft\/"},"modified":"2026-10-28T14:23:04","modified_gmt":"2026-10-28T01:23:04","slug":"payday-super-first-quarter-checks-for-employers","status":"publish","type":"post","link":"https:\/\/www.workstem.com\/au\/blog\/payday-super-first-quarter-checks-for-employers\/","title":{"rendered":"Payday Super: First-quarter checks for employers"},"content":{"rendered":"<p>Payday Super has now been implemented for three months, but a payroll process that appears to work is not necessarily a compliant one. Contributions can be calculated correctly and submitted on time, yet still fail to reach the right super fund because of incorrect member details, processing delays or rejected payments.<\/p>\n<p>For employers with 100\u20132,000 employees, the first quarter of the 2026\u201327 financial year is an opportunity to identify these gaps before they become recurring problems.<\/p>\n<p>The priority is to reconcile every pay run against the super contribution and reporting records, then establish a repeatable process for resolving exceptions. Here is what payroll, finance and HR teams should review.<\/p>\n<h2>What changed under Payday Super?<\/h2>\n<p>Payday Super took effect on 1 July 2026. Employers must generally calculate super guarantee (SG) at 12% of qualifying earnings (QE) and make contributions in line with each payday, rather than relying on the former quarterly payment schedule.<\/p>\n<p>Contributions generally need to reach the employee&#8217;s super fund within seven business days after payday. The law provides extended periods in specific circumstances, including certain first contributions for new employees. See the<span style=\"color: #3366ff;\"><a style=\"color: #3366ff;\" href=\"https:\/\/softwaredevelopers.ato.gov.au\/PaydaySuper\"> ATO&#8217;s Payday Super guidance<\/a><\/span> and the<a href=\"https:\/\/www.legislation.gov.au\/C2025A00057\/asmade\"><span style=\"color: #3366ff;\"> Payday Super legislation<\/span><\/a>.<\/p>\n<p>The change affects more than payment frequency. Employers also need to review how their payroll systems classify earnings, report super liabilities, process payments and handle errors.<\/p>\n<h3>1. Reconcile payroll, STP and super contributions<\/h3>\n<p><strong>Start by confirming that the super liability calculated in payroll matches the amount reported and the contribution ultimately received by each fund.<\/strong><\/p>\n<p>For each pay run, review the following records:<\/p>\n<ul>\n<li>Payroll results showing qualifying earnings and calculated SG.<\/li>\n<li>Single Touch Payroll (STP) reporting, including qualifying earnings and super liability.<\/li>\n<li>SuperStream or clearing-house transaction records.<\/li>\n<li>Payment confirmations, fund receipts and rejected contribution notifications.<\/li>\n<\/ul>\n<p>Investigate any difference rather than assuming it is a timing issue. A submitted payment file is evidence of an attempted transaction, not proof that every contribution reached the correct fund.<\/p>\n<h3>What should employers look for?<\/h3>\n<table>\n<tbody>\n<tr>\n<td style=\"text-align: center;\"><strong>Control<\/strong><\/td>\n<td style=\"text-align: center;\"><strong>What to verify<\/strong><\/td>\n<td style=\"text-align: center;\"><strong>Warning sign<\/strong><\/td>\n<\/tr>\n<tr>\n<td style=\"text-align: center;\"><strong>SG calculation<\/strong><\/td>\n<td style=\"text-align: center;\">QE and SG amounts agree with the payroll result<\/td>\n<td style=\"text-align: center;\">Contributions do not match the expected liability<\/td>\n<\/tr>\n<tr>\n<td style=\"text-align: center;\"><strong>STP reporting<\/strong><\/td>\n<td style=\"text-align: center;\">Reported QE and super liability reconcile to payroll<\/td>\n<td style=\"text-align: center;\">Reported values are missing or inconsistent<\/td>\n<\/tr>\n<tr>\n<td style=\"text-align: center;\"><strong>Payment status<\/strong><\/td>\n<td style=\"text-align: center;\">Each contribution has a traceable outcome<\/td>\n<td style=\"text-align: center;\">Transactions remain pending or rejected<\/td>\n<\/tr>\n<tr>\n<td style=\"text-align: center;\"><strong>Fund allocation<\/strong><\/td>\n<td style=\"text-align: center;\">Contributions are associated with the intended employee and fund<\/td>\n<td style=\"text-align: center;\">Payment cannot be allocated to a member<\/td>\n<\/tr>\n<\/tbody>\n<\/table>\n<p>Make the reconciliation part of the normal payroll close process. Waiting until the end of a quarter makes it harder to trace individual discrepancies.<\/p>\n<h3>2. Recheck how qualifying earnings are calculated<\/h3>\n<p><strong>Review the underlying pay-item configuration, not just the final super amount.<\/strong> Payday Super introduces qualifying earnings as the basis for calculating SG and changes the treatment of some payment categories compared with the previous framework.<\/p>\n<p>QE generally includes <span style=\"color: #3366ff;\"><a style=\"color: #3366ff;\" href=\"https:\/\/www.workstem.com\/au\/glossary\/ordinary-time-earnings\/\">ordinary time earnings<\/a><\/span>, commissions, salary sacrifice contributions that qualify under the rules, and relevant payments to workers covered by the extended employee definition. The same payment must not be counted twice simply because it falls into overlapping categories.<\/p>\n<p>For the first-quarter review, pay particular attention to:<\/p>\n<ul>\n<li>Commissions and bonuses.<\/li>\n<li>Salary sacrifice arrangements.<\/li>\n<li>Allowances, leave payments and other pay items requiring classification.<\/li>\n<li>Termination payments and adjustments.<\/li>\n<li>Contractors whose engagements may create a super guarantee obligation.<\/li>\n<\/ul>\n<p>Consider an employee who receives a fixed salary and a commission in the same pay period. If the commission is qualifying earnings, omitting it from the calculation could result in an understated SG liability even if the salary component is calculated correctly.<\/p>\n<p>The review should confirm that each pay item is classified appropriately under the applicable rules. Do not assume that a software default or a previous-period calculation is correct without checking it.<\/p>\n<h3>3. Review contribution timing against the fund receipt date<\/h3>\n<p><strong>The critical deadline is generally when the contribution reaches the employee&#8217;s fund, not when payroll exports a file or finance approves a payment.<\/strong><\/p>\n<p>Build the actual timeline for each pay run: payday, payment authorisation, processing, fund receipt and any subsequent correction. This will help determine whether your current schedule leaves enough time to resolve payment issues within the allowable period.<\/p>\n<p>For example, a fortnightly payroll might be processed on Friday, with finance approving the associated super payment later that day. If bank cut-off times or clearing-house processing delay fund receipt, the employer may have much less time available than the internal payment date suggests.<\/p>\n<p>Check that:<\/p>\n<ul>\n<li>Payment authorisation occurs early enough.<\/li>\n<li>Banking and provider processing times are understood.<\/li>\n<li>Weekends and public holidays are factored into internal scheduling.<\/li>\n<li>Rejected transactions are identified and assigned to someone for correction.<\/li>\n<\/ul>\n<p>The seven-business-day period is a statutory deadline, not a recommended internal processing target. Build in sufficient time to investigate problems before the deadline expires.<\/p>\n<h3>4. Test your process for rejected contributions<\/h3>\n<p><strong>Every rejected contribution needs an owner, a reason, a correction date and evidence of the eventual outcome.<\/strong><\/p>\n<p>Common causes include incorrect member numbers, outdated fund details, mismatched employee information and invalid transaction data. A rejected transaction should move into an exception process rather than disappear into a payment report.<\/p>\n<p>The payroll team should record the affected employee, amount, relevant pay date, fund, rejection reason and corrective action. Once the error is fixed, retain evidence of the resubmission and the contribution&#8217;s final status.<\/p>\n<p>The ATO&#8217;s<a href=\"https:\/\/community.ato.gov.au\/s\/article\/a07Mo00001qD2iH\/payday-super-has-started-heres-what-employers-need-to-know-and-do\"> f<span style=\"color: #3366ff;\">irst-year Payday Super guidance<\/span><\/a> advises employers to correct errors promptly and keep records of their actions.<\/p>\n<h3>Does the ATO provide a first-year grace period?<\/h3>\n<p><strong>No blanket exemption applies.<\/strong> The ATO will prioritise compliance activity for the first year, from 1 July 2026 to 30 June 2027. It recognises genuine attempts to comply and prompt remediation, but it does not remove employers&#8217; legal obligations.<\/p>\n<p>Employers should not rely on the first-year compliance approach as permission to continue paying super quarterly or leave rejected payments unresolved. The guideline from ATO distinguishes employers who attempt to pay each payday and fix problems promptly from those who continue to fall short.<\/p>\n<h3>5. Review payroll cash flow and payment controls<\/h3>\n<p><strong>Your cash-flow forecast should now reflect super liabilities at each pay cycle rather than treating them as a quarterly expense.<\/strong><\/p>\n<p>Finance teams should calculate expected SG alongside wages, PAYG withholding, payroll tax and other employment costs. The aim is to identify funding requirements before a pay run, not after the contribution payment is due.<\/p>\n<p>For each payroll group, document the amount expected, the scheduled payment date, the person responsible for approval and the fallback process if a payment cannot be authorised.<\/p>\n<p>Also check whether the business previously relied on the ATO&#8217;s Small Business Superannuation Clearing House. That service closed on 1 July 2026, so former users need a suitable alternative for ongoing contributions. The ATO&#8217;s announcement on Payday Super confirms the closure.<\/p>\n<h3>6. Check whether onboarding and contractor workflows are included<\/h3>\n<p><strong>A compliant payroll process must capture everyone for whom the business has a super obligation, including relevant workers who are not processed through ordinary payroll.<\/strong><\/p>\n<p>For new employees, verify that super fund details are collected and validated, and that any applicable extended first-contribution timeframe is tracked correctly. The 20-business-day period can apply in specified first-contribution circumstances; it is not a general extension for every subsequent payment.<\/p>\n<p>Contractors also require attention. An ABN does not automatically eliminate SG obligations where a contractor falls within the relevant extended definition of employee.<\/p>\n<p>Review how finance, procurement and operational managers communicate contractor payments to payroll, particularly where invoices are paid outside the main payroll system.<\/p>\n<p>For additional guidance, see Workstem&#8217;s articles on the<span style=\"color: #3366ff;\"><a style=\"color: #3366ff;\" href=\"https:\/\/www.workstem.com\/au\/blog\/payday-super-new-employees-how-20-business-day-rule-works\/\"> 20-business-day rule for new employees<\/a><\/span> and<span style=\"color: #3366ff;\"><a style=\"color: #3366ff;\" href=\"https:\/\/www.workstem.com\/au\/blog\/why-contractor-workflows-can-break-payday-super-even-when-payroll-is-correct\/\"> contractor workflows under Payday Super<\/a><\/span>.<\/p>\n<h2>What should employers do over the next 30 days?<\/h2>\n<p>Use the following action plan to turn the first-quarter review into a sustainable control process.<\/p>\n<table>\n<tbody>\n<tr>\n<td style=\"text-align: center;\"><strong>Timeframe<\/strong><\/td>\n<td style=\"text-align: center;\"><strong>Recommended action<\/strong><\/td>\n<td style=\"text-align: center;\"><strong>Intended outcome<\/strong><\/td>\n<\/tr>\n<tr>\n<td style=\"text-align: center;\"><strong>Week 1<\/strong><\/td>\n<td style=\"text-align: center;\">Reconcile payroll, STP and fund transaction records<\/td>\n<td style=\"text-align: center;\">Identify missing, rejected or inconsistent contributions<\/td>\n<\/tr>\n<tr>\n<td style=\"text-align: center;\"><strong>Week 2<\/strong><\/td>\n<td style=\"text-align: center;\">Review QE mapping and employee fund details<\/td>\n<td style=\"text-align: center;\">Correct calculation and data-quality issues<\/td>\n<\/tr>\n<tr>\n<td style=\"text-align: center;\"><strong>Week 3<\/strong><\/td>\n<td style=\"text-align: center;\">Test payment timing, approval ownership and exception escalation<\/td>\n<td style=\"text-align: center;\">Reduce delays and repeat errors<\/td>\n<\/tr>\n<tr>\n<td style=\"text-align: center;\"><strong>Week 4<\/strong><\/td>\n<td style=\"text-align: center;\">Document controls, assign ongoing owners and report unresolved issues<\/td>\n<td style=\"text-align: center;\">Establish a repeatable monthly review<\/td>\n<\/tr>\n<\/tbody>\n<\/table>\n<p>Prioritise outstanding contributions and unresolved exceptions before lower-risk process improvements. Where a possible shortfall is identified, assess the applicable legal requirements and seek advice from a qualified tax or superannuation professional where necessary.<\/p>\n<h2>How can payroll software help with Payday Super?<\/h2>\n<p>Payroll software can support compliance by calculating SG from configured qualifying earnings, preparing reporting data, tracking contributions and retaining transaction records. Its usefulness depends on accurate configuration, suitable integrations and a clear process for correcting exceptions.<\/p>\n<p>Workstem&#8217;s<span style=\"color: #3366ff;\"><a style=\"color: #3366ff;\" href=\"https:\/\/www.workstem.com\/au\/product\/payday-super\/\"> Payday Super software<\/a><\/span> brings together QE-based calculations, contribution processing and contribution-history reporting. Employers should still verify that their own pay items, employee data, payment arrangements and approval procedures are correctly configured.<\/p>\n<p>Review your first-quarter payroll and super workflow with Workstem to identify where calculation, payment and reconciliation processes can be better connected.<\/p>\n<h2>Frequently asked questions<\/h2>\n<ol>\n<li><strong>When did Payday Super start in Australia?<\/strong><\/li>\n<\/ol>\n<p>Payday Super commenced on 1 July 2026. Employers generally need to pay super in line with each payday and ensure contributions reach the relevant fund within seven business days, subject to specific exceptions.<\/p>\n<p><strong>2. What should employers audit after the first quarter?<\/strong><\/p>\n<p>Review QE calculations, STP reporting, payment timing, fund receipt records, rejected transactions, cash-flow planning and onboarding workflows. The goal is to identify discrepancies and establish controls before they recur.<\/p>\n<p><strong>3. Does an employer comply if the super payment file was submitted on time?<\/strong><\/p>\n<p>Not necessarily. The statutory timing requirement generally concerns when the contribution reaches the employee&#8217;s fund. A submitted payment can still be delayed or rejected.<\/p>\n<p><strong>4. Does the ATO&#8217;s first-year approach remove the risk of an SGC assessment?<\/strong><\/p>\n<p>No. ATO&#8217;s official guideline sets out a risk-based compliance approach for the first year; it does not change the underlying law or guarantee that an employer will avoid a charge.<\/p>\n<h2>Read more<\/h2>\n<h3>More Payday Super related articles<\/h3>\n<p><span style=\"color: #3366ff;\"><em><a style=\"color: #3366ff;\" href=\"https:\/\/www.workstem.com\/au\/blog\/how-pay-day-super-affects-your-business\/\" target=\"_blank\" rel=\"noopener\">How Payday Super Affects Your Business<\/a><\/em><\/span><\/p>\n<p class=\"page-title\"><span style=\"color: #3366ff;\"><em><a style=\"color: #3366ff;\" href=\"https:\/\/www.workstem.com\/au\/blog\/payday-super-cash-flow-management-avoiding-business-disruption\/\">Payday Super Cash Flow Management: Avoiding Business Disruption<\/a><\/em><\/span><\/p>\n<p class=\"page-title\"><span style=\"color: #3366ff;\"><em><a style=\"color: #3366ff;\" href=\"https:\/\/www.workstem.com\/au\/blog\/payday-super-rejected-payments-what-employers-should-do\/\">Payday Super Rejected Payments: What Employers Should Do<\/a><\/em><\/span><\/p>\n<p class=\"page-title\"><em><span style=\"color: #3366ff;\"><a style=\"color: #3366ff;\" href=\"https:\/\/www.workstem.com\/au\/blog\/payday-super-maximum-contribution-base-annual-mcb-explained\/\">Payday Super Maximum Contribution Base: Annual MCB Explained<\/a><\/span><\/em><\/p>\n<header class=\"entry-header\">\n<p class=\"page-title\"><span style=\"color: #3366ff;\"><em><a style=\"color: #3366ff;\" href=\"https:\/\/www.workstem.com\/au\/blog\/mvr-explained-for-employers-what-happens-before-super-is-sent\/\">MVR Explained for Employers: What Happens Before Super Is Sent<\/a><\/em><\/span><\/p>\n<\/header>\n<h3>Superannuation guides<\/h3>\n<p class=\"page-title\"><span style=\"color: #3366ff;\"><em><a style=\"color: #3366ff;\" href=\"https:\/\/www.workstem.com\/au\/blog\/superannuation-guarantee-2026-12-rate-complete-guide\/\">Superannuation Guarantee 2026: 12% Rate Complete Guide<\/a><\/em><\/span><\/p>\n<p><span style=\"color: #3366ff;\"><em><a style=\"color: #3366ff;\" href=\"https:\/\/www.workstem.com\/au\/blog\/casual-employment-and-superannuation-what-you-need-to-know\/\" target=\"_blank\" rel=\"noopener\">Casual Employment and Superannuation: What You Need to Know<\/a><\/em><\/span><\/p>\n<p><span style=\"color: #3366ff;\"><em><a style=\"color: #3366ff;\" href=\"https:\/\/www.workstem.com\/au\/blog\/superannuation-guide\/\" target=\"_blank\" rel=\"noopener\">Guide To Superannuation<\/a><\/em><\/span><\/p>\n","protected":false},"excerpt":{"rendered":"<p>Payday Super has now been implemented for three months, but a payroll process that appears to work is not necessarily a compliant one. Contributions can be calculated correctly and submitted on time, yet still fail to reach the right super fund because of incorrect member details, processing delays or rejected payments. For employers with 100\u20132,000&#8230;<\/p>\n","protected":false},"author":16,"featured_media":3452,"comment_status":"open","ping_status":"closed","sticky":false,"template":"","format":"standard","meta":{"footnotes":""},"categories":[1],"tags":[57,42,48,47],"class_list":["post-3423","post","type-post","status-publish","format-standard","has-post-thumbnail","hentry","category-uncategorized","tag-payday-super","tag-popular","tag-stp","tag-superannuation"],"yoast_head":"<!-- This site is optimized with the Yoast SEO plugin v28.7 - https:\/\/yoast.com\/product\/yoast-seo-wordpress\/ -->\n<title>Payday Super: First-quarter checks for employers - Workstem Australia<\/title>\n<meta name=\"description\" content=\"Audit your first Payday Super quarter: check qualifying earnings, fund receipts, STP reporting and rejected payments.\" \/>\n<meta name=\"robots\" content=\"index, follow, max-snippet:-1, max-image-preview:large, max-video-preview:-1\" \/>\n<link rel=\"canonical\" href=\"https:\/\/www.workstem.com\/au\/blog\/payday-super-first-quarter-checks-for-employers\/\" \/>\n<meta property=\"og:locale\" content=\"en_US\" \/>\n<meta property=\"og:type\" content=\"article\" \/>\n<meta property=\"og:title\" content=\"Payday Super: First-quarter checks for employers - 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